MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-433
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cja-Mir-433  Cpo-Mir-433  Dno-Mir-433  Eca-Mir-433  Ete-Mir-433  Hsa-Mir-433  Laf-Mir-433  Mml-Mir-433  Mmr-Mir-433  Mmu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0352: 6784-6857 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-433)		 Mir-337-v1 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-337-v2 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-433 chrUn0352: 6784-6857 [+] UCSC Ensembl
Mir-127 chrUn0352: 7903-7958 [+] UCSC Ensembl
Mir-432 chrUn0352: 9852-9920 [+] UCSC Ensembl
Mir-136-v1 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-136-v2 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-370 chrUn0352: 31816-31871 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGAAGGCCCAGUGCCCCGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCGCUGCUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCUCCACACUACGAGGG
Get precursor sequence
Structure
        10         20         30        40        50        60      
GAAGAAGAAGGCCCAGU-  C-| G      GUA   U           U    AGAGAGGCUAGAU 
                  GC  CC GGAGAA   CGG GAGCCUGUCAU AUUC             C
                  CG  GG CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGGAGCAUCACACCUCGG  AU^ A      GUG   C           C    AAGAGUCGUCGCU 
  130       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-433_5p*
mirBase accessionMIMAT0048449
Sequence 
0- UACGGUGAGCCUGUCAUUAUUC -22
Get sequence
Mature sequence

Ocu-Mir-433_3p
mirBase accessionMIMAT0048450
Sequence 
52- AUCAUGAUGGGCUCCUCGGUGU -74
Get sequence