MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-127
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0352: 7903-7958 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-337-v1 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-337-v2 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-433 chrUn0352: 6784-6857 [+] UCSC Ensembl
Mir-127 chrUn0352: 7903-7958 [+] UCSC Ensembl
Mir-432 chrUn0352: 9852-9920 [+] UCSC Ensembl
Mir-136-v1 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-136-v2 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-370 chrUn0352: 31816-31871 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCCUCAUCUGCUUCCUUCG
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Structure
        10        20          30        40        50        
GGUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUCCUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-127_5p*
mirBase accessionMIMAT0048208
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
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Mature sequence

Ocu-Mir-127_3p
mirBase accessionMIMAT0048209
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
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