MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-136-v1

Family name MIR-136 (all species)
Seed AUCAUCG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-136
Paralogues Ocu-Mir-136-v2 
Orthologues Bta-Mir-136-v1  Cfa-Mir-136-v1  Cja-Mir-136  Cpo-Mir-136-v1  Dno-Mir-136-v1  Eca-Mir-136-v1  Ete-Mir-136-v1  Hsa-Mir-136-v1  Laf-Mir-136  Mml-Mir-136-v1  Mmr-Mir-136-v1  Mmu-Mir-136-v1  Pab-Mir-136  Rno-Mir-136-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0352: 10072-10127 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-136-v1)		 Mir-337-v1 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-337-v2 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-433 chrUn0352: 6784-6857 [+] UCSC Ensembl
Mir-127 chrUn0352: 7903-7958 [+] UCSC Ensembl
Mir-432 chrUn0352: 9852-9920 [+] UCSC Ensembl
Mir-136-v1 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-136-v2 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-370 chrUn0352: 31816-31871 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUGGUGGUCUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAGGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCUUGUCGUCGGCGGGA
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Structure
        10          20        30        40        50        
CCAUGGUGGUCUUGGAU--|       G        C     UUU          UUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGGA    \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACCU    U
AGGGCGGCUGCUGUUCUAU^       A        -     UCU          CGGA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-136-v1_5p*
mirBase accessionMIMAT0048232
Sequence 
0- ACUCCAUUUGUUUUGAUGAUGGA -23
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Mature sequence

Ocu-Mir-136-v1_3p
mirBase accessionMIMAT0048233
Sequence 
34- CAUCAUCGUCUCAAAUGAGUCU -56
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