| MirGeneDB ID | Cja-Mir-136 |
|---|---|
| Family name | MIR-136 (all species) |
| Seed | CUCCAUU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-136-v1 Bta-Mir-136-v2 Cfa-Mir-136-v1 Cfa-Mir-136-v2 Cpo-Mir-136-v1 Cpo-Mir-136-v2 Dno-Mir-136-v1 Dno-Mir-136-v2 Eca-Mir-136-v1 Eca-Mir-136-v2 Ete-Mir-136-v1 Ete-Mir-136-v2 Hsa-Mir-136-v1 Hsa-Mir-136-v2 Laf-Mir-136 Mml-Mir-136-v1 Mml-Mir-136-v2 Mmr-Mir-136-v1 Mmr-Mir-136-v2 Mmu-Mir-136-v1 Mmu-Mir-136-v2 Ocu-Mir-136-v1 Ocu-Mir-136-v2 Pab-Mir-136 Rno-Mir-136-v1 Rno-Mir-136-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131692180-131692235 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUCGGUGGUGCUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCGUCGGAUGACGet precursor sequence |
| Structure | 10 20 30 40 50 CCUCGGUGGUGCUGGAU--| G C UUU AUUCU GAGCCCUC GAGGACUC AUUUG UGAUGAUGG \ CUUGGGAG CUUCUGAG UAAAC GCUACUACC U CAGUAGGCUGCUUUACUAU^ A - UCU UCGUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Cja-Mir-136_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUCCAUUUGUUUUGAUGAUGG -22
Get sequence
|
| Star sequence | Cja-Mir-136_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- AUCAUCGUCUCAAAUGAGUCU -56
Get sequence
|
