Mir-136-v2

MirGeneDB ID

Hsa-Mir-136-v2

Family name

MIR-136 (all species)

Seed

CUCCAUU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-136

Paralogues

Hsa-Mir-136-v1

Orthologues

Bta-Mir-136-v2 Cfa-Mir-136-v2 Cja-Mir-136 Cpo-Mir-136-v2 Dno-Mir-136-v2 Eca-Mir-136-v2 Ete-Mir-136-v2 Laf-Mir-136 Mml-Mir-136-v2 Mmr-Mir-136-v2 Mmu-Mir-136-v2 Ocu-Mir-136-v2 Pab-Mir-136 Rno-Mir-136-v2

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chr14: 100884716-100884771 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-136-v2)

Mir-770 chr14: 100852409-100852470 [+] UCSC Ensembl
Mir-493 chr14: 100869075-100869136 [+] UCSC Ensembl
Mir-337-v1 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-337-v2 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-431 chr14: 100881026-100881089 [+] UCSC Ensembl
Mir-433 chr14: 100881897-100881970 [+] UCSC Ensembl
Mir-127 chr14: 100883001-100883056 [+] UCSC Ensembl
Mir-432 chr14: 100884496-100884564 [+] UCSC Ensembl
Mir-136-v2 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-136-v1 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-370 chr14: 100911151-100911207 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCUCGGUGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCGUCGGAUGGA

Get precursor sequence

Structure

        10          20        30        40        50        
CCUCGGUGGUGUUGGAU--|       G        C     UUU         AUUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGG     \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACC     U
AGGUAGGCUGCUUUACUAU^       A        -     UCU         UCGUA 
    110       100        90         80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-136-v2_5p

mirBase accession

MIMAT0000448

Sequence

0- ACUCCAUUUGUUUUGAUGAUGG -22

Get sequence

Proposed targets

microrna.org: MIMAT0000448
TargetScanVert: hsa-miR-136-5p
TargetMiner: hsa-miR-136-5p
miRDB: MIMAT0000448

Co-mature sequence

Hsa-Mir-136-v2_3p

mirBase accession

MIMAT0004606

Sequence

35- AUCAUCGUCUCAAAUGAGUCU -56

Get sequence

Proposed targets

microrna.org: MIMAT0004606
TargetScanVert: hsa-miR-136-3p
TargetMiner: hsa-miR-136-3p
miRDB: MIMAT0004606