MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-127
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr14: 100883001-100883056 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)
Mir-770 chr14: 100852409-100852470 [+] UCSC Ensembl
Mir-493 chr14: 100869075-100869136 [+] UCSC Ensembl
Mir-337-v1 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-337-v2 chr14: 100874515-100874574 [+] UCSC Ensembl
Mir-431 chr14: 100881026-100881089 [+] UCSC Ensembl
Mir-433 chr14: 100881897-100881970 [+] UCSC Ensembl
Mir-127 chr14: 100883001-100883056 [+] UCSC Ensembl
Mir-432 chr14: 100884496-100884564 [+] UCSC Ensembl
Mir-136-v2 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-136-v1 chr14: 100884716-100884771 [+] UCSC Ensembl
Mir-370 chr14: 100911151-100911207 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCG
Get precursor sequence
Structure
        10        20          30        40        50        
GGUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-127_5p*

mirBase accessionMIMAT0004604
Sequence
0- CUGAAGCUCAGAGGGCUCUGAUU -23
Get sequence
Proposed targets microrna.org: MIMAT0004604
TargetScanVert: hsa-miR-127-5p
TargetMiner: hsa-miR-127-5p
miRDB: MIMAT0004604
Mature sequence

Hsa-Mir-127_3p

mirBase accessionMIMAT0000446
Sequence
34- UCGGAUCCGUCUGAGCUUGGCU -56
Get sequence
Proposed targets microrna.org: MIMAT0000446
TargetScanVert: hsa-miR-127-3p
TargetMiner: hsa-miR-127-3p
miRDB: MIMAT0000446