MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-127
Paralogues
Orthologues Bta-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chr8: 69104942-69104997 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)
Mir-493 chr8: 69094351-69094412 [+] UCSC Ensembl
Mir-433 chr8: 69103838-69103911 [+] UCSC Ensembl
Mir-127 chr8: 69104942-69104997 [+] UCSC Ensembl
Mir-432 chr8: 69106428-69106496 [+] UCSC Ensembl
Mir-136-v1 chr8: 69106615-69106670 [+] UCSC Ensembl
Mir-136-v2 chr8: 69106615-69106670 [+] UCSC Ensembl
Mir-370 chr8: 69132798-69132854 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCG
Get precursor sequence
Structure
        10        20          30        40        50        
GGUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-127_5p*

mirBase accessionNone
Sequence
0- CUGAAGCUCAGAGGGCUCUGAUU -23
Get sequence
Mature sequence

Cfa-Mir-127_3p

mirBase accessionMIMAT0006713
Sequence
34- UCGGAUCCGUCUGAGCUUGGCU -56
Get sequence
Proposed targets TargetScanVert: cfa-miR-127
miRDB: MIMAT0006713