| MirGeneDB ID | Cja-Mir-127 |
|---|---|
| Family name | MIR-127 (all species) |
| Seed | UGAAGCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-127 Cfa-Mir-127 Cpo-Mir-127 Dno-Mir-127 Eca-Mir-127 Ete-Mir-127 Hsa-Mir-127 Laf-Mir-127 Mml-Mir-127 Mmr-Mir-127 Mmu-Mir-127 Ocu-Mir-127 Pab-Mir-127 Rno-Mir-127 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131690462-131690517 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGUCUCACUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCGGet precursor sequence |
| Structure | 10 20 30 40 50 GGUCUCACUGUGAUCACUGUC--| A U G G C UCAGA UCC GCC GCU AAGCUCAGA GG UCUGAU \ AGG UGG CGG UUCGAGUCU CC AGGCUA A GCUUCCUUCGUCUACUACUCUGA^ C U - G U CUAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-127_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUGAAGCUCAGAGGGCUCUGAUU -23
Get sequence
|
| Co-mature sequence | Cja-Mir-127_3p (predicted) |
| mirBase accession | None |
| Sequence |
34- UCGGAUCCGUCUGAGCUUGGCU -56
Get sequence
|
