MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species Cow (Bos taurus)
MiRBase ID bta-mir-127
Paralogues
Orthologues Cfa-Mir-127  Cpo-Mir-127  Dno-Mir-127  Ete-Mir-127  Hsa-Mir-127  Mml-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037348.1: 65780711-65780766 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-493 NC_037348.1: 65766695-65766757 [+] UCSC Ensembl
Mir-431 NC_037348.1: 65778736-65778799 [+] UCSC Ensembl
Mir-433 NC_037348.1: 65779607-65779680 [+] UCSC Ensembl
Mir-127 NC_037348.1: 65780711-65780766 [+] UCSC Ensembl
Mir-432 NC_037348.1: 65782197-65782265 [+] UCSC Ensembl
Mir-136-v2 NC_037348.1: 65782383-65782439 [+] UCSC Ensembl
Mir-136-v1 NC_037348.1: 65782384-65782439 [+] UCSC Ensembl
Mir-370 NC_037348.1: 65808196-65808252 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUCGCUUUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCCUCAUCUGCUUCCUUCG
Get precursor sequence
Structure
        10        20          30        40        50        
CUCCUCGCUUUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUCCUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-127_5p*
mirBase accessionNone
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
Get sequence
Mature sequence

Bta-Mir-127_3p
mirBase accessionMIMAT0003787
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
Get sequence
Proposed targets TargetScanVert: bta-miR-127