MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-127
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_111: 953628-953683 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-493 scaffold_111: 942145-942206 [+] UCSC
Mir-337-v1 scaffold_111: 946840-946900 [+] UCSC
Mir-337-v2 scaffold_111: 946840-946900 [+] UCSC
Mir-431 scaffold_111: 951653-951716 [+] UCSC
Mir-12073 scaffold_111: 952329-952402 [+] UCSC
Mir-433 scaffold_111: 952524-952597 [+] UCSC
Mir-127 scaffold_111: 953628-953683 [+] UCSC
Mir-432 scaffold_111: 955129-955197 [+] UCSC
Mir-136-v2 scaffold_111: 955349-955404 [+] UCSC
Mir-136-v1 scaffold_111: 955349-955404 [+] UCSC
Mir-370 scaffold_111: 977812-977869 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCG
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Structure
        10        20          30        40        50        
GAUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-127_5p*
mirBase accessionMIMAT0046972
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
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Mature sequence

Cpo-Mir-127_3p
mirBase accessionMIMAT0046973
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
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