MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-127

Family name MIR-127 (all species)
Seed CGGAUCC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-127
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Ocu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr12: 109592854-109592909 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-434 chr12: 109594527-109594586 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-370 chr12: 109618270-109618326 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACGCCGCUUUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCCUCCCUCG
Get precursor sequence
Structure
        10        20          30        40        50        
GACGCCGCUUUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUCCCUCCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-127_5p*
mirBase accessionMIMAT0004530
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
Get sequence
Proposed targets microrna.org: MIMAT0004530
TargetScanVert: mmu-miR-127-5p
miRDB: MIMAT0004530
Mature sequence

Mmu-Mir-127_3p
mirBase accessionMIMAT0000139
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
Get sequence
Proposed targets microrna.org: MIMAT0000139
TargetScanVert: mmu-miR-127-3p
miRDB: MIMAT0000139