MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-136-v1

Family name MIR-136 (all species)
Seed CUCCAUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-136
Paralogues Mmu-Mir-136-v2 
Orthologues Bta-Mir-136-v1  Cfa-Mir-136-v1  Cpo-Mir-136-v1  Dno-Mir-136-v1  Ete-Mir-136-v1  Hsa-Mir-136-v1  Mml-Mir-136-v1  Ocu-Mir-136-v1  Rno-Mir-136-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr12: 109595331-109595386 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-136-v1)
Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-370 chr12: 109618270-109618326 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCAACGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAAGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUGUCGUCGGUUGGA
Get precursor sequence
Structure
        10          20        30        40        50        
CUUCAACGGUGUUGGAU--|       G        C     UUU          UUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGGA    \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACCU    U
AGGUUGGCUGCUGUACUAU^       A        -     UCU          CGAA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
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Mature sequence

Mmu-Mir-136-v1_5p

mirBase accessionMIMAT0000148
Sequence
0- ACUCCAUUUGUUUUGAUGAUGGA -23
Get sequence
Proposed targets microrna.org: MIMAT0000148
TargetScanVert: mmu-miR-136-5p
miRDB: MIMAT0000148
Co-mature sequence

Mmu-Mir-136-v1_3p

mirBase accessionMIMAT0004532
Sequence
34- CAUCAUCGUCUCAAAUGAGUCU -56
Get sequence
Proposed targets microrna.org: MIMAT0004532
TargetScanVert: mmu-miR-136-3p
miRDB: MIMAT0004532