MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-136-v1

Family name MIR-136 (all species)
Seed AUCAUCG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-136
Paralogues Mmr-Mir-136-v2 
Orthologues Bta-Mir-136-v1  Cfa-Mir-136-v1  Cja-Mir-136  Cpo-Mir-136-v1  Dno-Mir-136-v1  Eca-Mir-136-v1  Ete-Mir-136-v1  Hsa-Mir-136-v1  Laf-Mir-136  Mml-Mir-136-v1  Mmu-Mir-136-v1  Ocu-Mir-136-v1  Pab-Mir-136  Rno-Mir-136-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-136-v1)
Mir-136-v1 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Mir-136-v2 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCGGUGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCGUCGGUUGGA
Get precursor sequence
Structure
        10          20        30        40        50        
GCUCGGUGGUGUUGGAU--|       G        C     UUU          UUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGGA    \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACCU    U
AGGUUGGCUGCUUUACUAU^       A        -     UCU          CGUA 
    110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-136-v1_5p*

mirBase accessionNone
Sequence
0- ACUCCAUUUGUUUUGAUGAUGGA -23
Get sequence
Mature sequence

Mmr-Mir-136-v1_3p

mirBase accessionMIMAT0049156
Sequence
34- CAUCAUCGUCUCAAAUGAGUCU -56
Get sequence