MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-136-v1

Family name MIR-136 (all species)
Seed AUCAUCG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-136-v2 
Orthologues Bta-Mir-136-v1  Cfa-Mir-136-v1  Cja-Mir-136  Cpo-Mir-136-v1  Dno-Mir-136-v1  Eca-Mir-136-v1  Hsa-Mir-136-v1  Laf-Mir-136  Mml-Mir-136-v1  Mmr-Mir-136-v1  Mmu-Mir-136-v1  Ocu-Mir-136-v1  Pab-Mir-136  Rno-Mir-136-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980297: 82397135-82397190 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCGCGGCGGUAUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCUUCGGUUGGA
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Structure
        10          20        30        40        50        
CCGCGGCGGUAUUGGAU--|       G        C     UUU          UUCU 
                   GAGCCCUC GAGGACUC AUUUG   UGAUGAUGGA    \
                   CUUGGGAG CUUCUGAG UAAAC   GCUACUACCU    U
AGGUUGGCUUCUUUACUAU^       A        -     UCU          CGUA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
To
Star sequence

Ete-Mir-136-v1_5p*

mirBase accessionNone
Sequence
0- ACUCCAUUUGUUUUGAUGAUGGA -23
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Mature sequence

Ete-Mir-136-v1_3p

mirBase accessionNone
Sequence
34- CAUCAUCGUCUCAAAUGAGUCU -56
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