| MirGeneDB ID | Pab-Mir-136 |
|---|---|
| Family name | MIR-136 (all species) |
| Seed | CUCCAUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-136-v1 Bta-Mir-136-v2 Cfa-Mir-136-v1 Cfa-Mir-136-v2 Cja-Mir-136 Cpo-Mir-136-v1 Cpo-Mir-136-v2 Dno-Mir-136-v1 Dno-Mir-136-v2 Eca-Mir-136-v1 Eca-Mir-136-v2 Ete-Mir-136-v1 Ete-Mir-136-v2 Hsa-Mir-136-v1 Hsa-Mir-136-v2 Laf-Mir-136 Mml-Mir-136-v1 Mml-Mir-136-v2 Mmr-Mir-136-v1 Mmr-Mir-136-v2 Mmu-Mir-136-v1 Mmu-Mir-136-v2 Ocu-Mir-136-v1 Ocu-Mir-136-v2 Rno-Mir-136-v1 Rno-Mir-136-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105310838-105310893 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUCGGUGGUGUUGGAUGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCUAUCAUUUCGUCGGAUGGAGet precursor sequence |
| Structure | 10 20 30 40 50 CCUCGGUGGUGUUGGAU--| G C UUU UUCU GAGCCCUC GAGGACUC AUUUG UGAUGAUGGA \ CUUGGGAG CUUCUGAG UAAAC GCUACUACCU U AGGUAGGCUGCUUUACUAU^ A - UCU CGUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Mature sequence | Pab-Mir-136_5p |
| mirBase accession | None |
| Sequence |
0- ACUCCAUUUGUUUUGAUGAUGGA -23
Get sequence
|
| Star sequence | Pab-Mir-136_3p* |
| mirBase accession | None |
| Sequence |
35- AUCAUCGUCUCAAAUGAGUCU -56
Get sequence
|
