MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-434

Family name MIR-434 (all species)
Seed UUGAACC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-434
Paralogues
Orthologues Rno-Mir-434 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(mm10)
chr12: 109594527-109594586 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-434)
Mir-770 chr12: 109563710-109563765 [+] UCSC Ensembl
Mir-673 chr12: 109572004-109572066 [+] UCSC Ensembl
Mir-493 chr12: 109580243-109580305 [+] UCSC Ensembl
Mir-337-as chr12: 109585813-109585873 [-] UCSC Ensembl
Mir-337 chr12: 109585818-109585871 [+] UCSC Ensembl
Mir-540 chr12: 109586085-109586143 [+] UCSC Ensembl
Mir-431 chr12: 109590459-109590522 [+] UCSC Ensembl
Mir-433 chr12: 109591729-109591802 [+] UCSC Ensembl
Mir-127 chr12: 109592854-109592909 [+] UCSC Ensembl
Mir-434 chr12: 109594527-109594586 [+] UCSC Ensembl
Mir-136-v2 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-136-v1 chr12: 109595331-109595386 [+] UCSC Ensembl
Mir-370 chr12: 109618270-109618326 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAACAUCGCUCGACUCUGGGUUUGAACCAAAGCUCGACUCAUGGUUUGAACCAUUACUUAAUUCGUGGUUUGAACCAUCACUCGACUCCUGGUUCGAACCAUCAUCACUUGAUUCCUCCA
Get precursor sequence
Structure
        10          20        30         40        50         
AAACAUCGCUCGACUCUG--           A-| C    CUC      UG    AUUACU 
                    GGUUUGAACCA  AG UCGA   AUGGUU  AACC      U
                    CCAAGCUUGGU  UC AGCU   UACCAA  UUGG      A
ACCUCCUUAGUUCACUACUA           CC^ -    CAC      GU    UGCUUA 
.       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-434_5p*

mirBase accessionMIMAT0001421
Sequence
0- AGCUCGACUCAUGGUUUGAACC -22
Get sequence
Proposed targets microrna.org: MIMAT0001421
TargetScanVert: mmu-miR-434-5p
miRDB: MIMAT0001421
Mature sequence

Mmu-Mir-434_3p

mirBase accessionMIMAT0001422
Sequence
38- UUUGAACCAUCACUCGACUCCU -60
Get sequence
Proposed targets microrna.org: MIMAT0001422
TargetScanVert: mmu-miR-434-3p
miRDB: MIMAT0001422