Mir-337-v2

MirGeneDB ID

Ocu-Mir-337-v2

Family name

MIR-337 (all species)

Seed

AACGGCU

Species

Rabbit (Oryctolagus cuniculus)

MiRBase ID

ocu-mir-337

Paralogues

Ocu-Mir-337-as Ocu-Mir-337-v1

Orthologues

Cja-Mir-337 Cpo-Mir-337-v2 Dno-Mir-337-v2 Eca-Mir-337 Hsa-Mir-337-v2 Laf-Mir-337 Mml-Mir-337-v2 Mmr-Mir-337-v2 Mmu-Mir-337 Pab-Mir-337 Rno-Mir-337

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(oryCun2_add)

chrUn0352: 1562-1622 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-337-v2)

Mir-337-v1 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-337-v2 chrUn0352: 1562-1622 [+] UCSC Ensembl
Mir-433 chrUn0352: 6784-6857 [+] UCSC Ensembl
Mir-127 chrUn0352: 7903-7958 [+] UCSC Ensembl
Mir-432 chrUn0352: 9852-9920 [+] UCSC Ensembl
Mir-136-v1 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-136-v2 chrUn0352: 10072-10127 [+] UCSC Ensembl
Mir-370 chrUn0352: 31816-31871 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CGCGGCCCGCGGUCGGUAGUUGGGGGAUGGGAACGGCUUCAUACAGGAGUUGAUUGCACAGUCAUCCAGCUCCUAUAUGAUGCCUUUCUUCAUCCUCUUCAACCACGCACAGCCUCCGGAC

Get precursor sequence

Structure

        10        20           30        40        50         
CGCGGCCCGCGGUCGGUA    --       -|   C   U     C       GAUUGCA 
                  GUUG  GGGGAUG GGAA GGC UCAUA AGGAGUU       C
                  CAAC  CUCCUAC UCUU CCG AGUAU UCCUCGA       A
CAGGCCUCCGACACGCAC    UU       U^   U   U     A       CCUACUG 
 .       110       100        90        80        70        60