| MirGeneDB ID | Cja-Mir-337 |
|---|---|
| Family name | MIR-337 (all species) |
| Seed | UCCUAUA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cpo-Mir-337-v1 Cpo-Mir-337-v2 Dno-Mir-337-v1 Dno-Mir-337-v2 Eca-Mir-337 Eca-Mir-337-as Hsa-Mir-337-as Hsa-Mir-337-v1 Hsa-Mir-337-v2 Laf-Mir-337 Mml-Mir-337-as Mml-Mir-337-v1 Mml-Mir-337-v2 Mmr-Mir-337-v1 Mmr-Mir-337-v2 Mmu-Mir-337 Mmu-Mir-337-as Ocu-Mir-337-as Ocu-Mir-337-v1 Ocu-Mir-337-v2 Pab-Mir-337 Rno-Mir-337 Rno-Mir-337-as |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131682138-131682197 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UUGCGACCGUAGUCAGUAGUUGGGGGGUGGGAACGGCUUCAUACAGGAGUUGAUGCACAGUUAUCCAGCUCCUAUAUGAUGCCUUUCUUCAUCCCUUCAACCACGCGCAGCCCCGGACCCGet precursor sequence |
| Structure | 10 20 30 40 50 UUGCGACCGUAGUCAGUA- - -| C U C GAUGCAC GUUG GGGGGUG GGAA GGC UCAUA AGGAGUU \ CAAC UCCCUAC UCUU CCG AGUAU UCCUCGA A CCCAGGCCCCGACGCGCAC U U^ U U A CCUAUUG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-337_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GAACGGCUUCAUACAGGAGUU -21
Get sequence
|
| Mature sequence | Cja-Mir-337_3p |
| mirBase accession | None |
| Sequence |
38- CUCCUAUAUGAUGCCUUUCUUC -60
Get sequence
|
