MirGeneDB 3.0

MirGeneDB ID

Rno-Mir-337-as

Family name MIR-337 (all species)
Seed GAAAGGC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3544
Paralogues Rno-Mir-337 
Orthologues Cja-Mir-337  Eca-Mir-337  Eca-Mir-337-as  Hsa-Mir-337-as  Laf-Mir-337  Mml-Mir-337-as  Mmu-Mir-337  Mmu-Mir-337-as  Ocu-Mir-337-as  Pab-Mir-337 
Node of Origin (locus) Euarchontoglires
Node of Origin (family) Eutheria
Genome context
(rn6)
chr6: 133705943-133706003 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-337-as)
Mir-770 chr6: 133682975-133683030 [+] UCSC Ensembl
Mir-673 chr6: 133691391-133691453 [+] UCSC Ensembl
Mir-493 chr6: 133699522-133699583 [+] UCSC Ensembl
Mir-337-as chr6: 133705943-133706003 [-] UCSC Ensembl
Mir-337 chr6: 133705948-133706001 [+] UCSC Ensembl
Mir-540 chr6: 133706216-133706274 [+] UCSC Ensembl
Mir-431 chr6: 133711444-133711507 [+] UCSC Ensembl
Mir-433 chr6: 133712345-133712418 [+] UCSC Ensembl
Mir-127 chr6: 133713452-133713507 [+] UCSC Ensembl
Mir-136-v2 chr6: 133716775-133716830 [+] UCSC Ensembl
Mir-136-v1 chr6: 133716775-133716830 [+] UCSC Ensembl
Mir-370 chr6: 133739928-133739984 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGACGCCACACGCGGUUGAAGGGGGUGAAGAAAGGCAUCAUAUAGGAGCUGAAUGGCUGUGCAAUCAACUCCUGCAUGACGCCGUUCCCACCCCCCAACUUCUCACUACACUGGGACCC
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Structure
        10        20          30        40        50        60
CCGGACGCCACACGCGGUUGAA--|      AA   A   A    A      C  AAUGGC 
                        GGGGGUG  GAA GGC UCAU UAGGAG UG      U
                        CCCCCAC  CUU CCG AGUA GUCCUC AC      G
CCCAGGGUCACAUCACUCUUCAAC^      C-   G   C    C      A  UAACGU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Mature sequence

Rno-Mir-337-as_5p

mirBase accessionNone
Sequence
0- AGAAAGGCAUCAUAUAGGAGCUG -23
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Co-mature sequence

Rno-Mir-337-as_3p

mirBase accessionMIMAT0017798
Sequence
39- ACUCCUGCAUGACGCCGUUCCC -61
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Proposed targets TargetScanVert: rno-miR-3544
miRDB: MIMAT0017798