MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-370

Family name MIR-370 (all species)
Seed CCUGCUG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-370
Paralogues
Orthologues Bta-Mir-370  Cfa-Mir-370  Cja-Mir-370  Cpo-Mir-370  Eca-Mir-370  Hsa-Mir-370  Mml-Mir-370  Mmr-Mir-370  Mmu-Mir-370  Ocu-Mir-370  Pab-Mir-370 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(rn6)		 chr6: 133739928-133739984 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-370)		 Mir-673 chr6: 133691391-133691453 [+] UCSC Ensembl
Mir-493 chr6: 133699522-133699583 [+] UCSC Ensembl
Mir-337-as chr6: 133705943-133706003 [-] UCSC Ensembl
Mir-337 chr6: 133705948-133706001 [+] UCSC Ensembl
Mir-540 chr6: 133706216-133706274 [+] UCSC Ensembl
Mir-431 chr6: 133711444-133711507 [+] UCSC Ensembl
Mir-433 chr6: 133712345-133712418 [+] UCSC Ensembl
Mir-127 chr6: 133713452-133713507 [+] UCSC Ensembl
Mir-136-v2 chr6: 133716775-133716830 [+] UCSC Ensembl
Mir-136-v1 chr6: 133716775-133716830 [+] UCSC Ensembl
Mir-370 chr6: 133739928-133739984 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUACAAGUCCGGGGCCUAAGACAGAGAGACCAGGUCACGUCUCUGCAGUUACACAGCUCAUGAGUGCCUGCUGGGGUGGAACCUGGUUUGUCUGUCUGUCUAUCACCAUCACUCAGG
Get precursor sequence
Structure
        10          20        30        40        50        
CUACAAGUCCGGGGCCUA--|      G         CA GU   U    U   ACAGC 
                    AGACAGA AGACCAGGU  C  CUC GCAG UAC     \
                    UCUGUCU UUUGGUCCA  G  GGG CGUC GUG     U
GGACUCACUACCACUAUCUG^      G         AG UG   U    C   AGUAC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Rno-Mir-370_5p*
mirBase accessionMIMAT0017202
Sequence 
0- CAGGUCACGUCUCUGCAGUUAC -22
Get sequence
Proposed targets TargetScanVert: rno-miR-370-5p
miRDB: MIMAT0017202
Mature sequence

Rno-Mir-370_3p
mirBase accessionMIMAT0003122
Sequence 
35- GCCUGCUGGGGUGGAACCUGGU -57
Get sequence
Proposed targets microrna.org: MIMAT0003122
TargetScanVert: rno-miR-370-3p
miRDB: MIMAT0003122