| MirGeneDB ID | Cja-Mir-370 |
|---|---|
| Family name | MIR-370 (all species) |
| Seed | CCUGCUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-370 Cfa-Mir-370 Cpo-Mir-370 Eca-Mir-370 Hsa-Mir-370 Mml-Mir-370 Mmr-Mir-370 Mmu-Mir-370 Ocu-Mir-370 Pab-Mir-370 Rno-Mir-370 |
| Node of Origin (locus) | Boreoeutheria |
| Node of Origin (family) | Boreoeutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021924.1: 131718304-131718360 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGUACAAGUCGGGGCACAAGACAGAGAAGCCAGGUCACGUCUCUGCAGUUACACAGCUCACGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAACACCAGAGCUGCUGGet precursor sequence |
| Structure | 10 20 30 40 50 CGUACAAGUCGGGGCACA--| GA - CA GU U U ACAGC AGACAGA AG CCAGGU C CUC GCAG UAC \ UCUGUCU UC GGUCCA G GGG CGUC GUG U GUCGUCGAGACCACAAUCUG^ G- U AG UG U C AGCAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-370_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAGGUCACGUCUCUGCAGUUAC -22
Get sequence
|
| Mature sequence | Cja-Mir-370_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- GCCUGCUGGGGUGGAACCUGGU -57
Get sequence
|
