| MirGeneDB ID | Pab-Mir-370 |
|---|
| Family name |
MIR-370 (all species) |
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| Seed |
CCUGCUG |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-370
Cfa-Mir-370
Cja-Mir-370
Cpo-Mir-370
Eca-Mir-370
Hsa-Mir-370
Mml-Mir-370
Mmr-Mir-370
Mmu-Mir-370
Ocu-Mir-370
Rno-Mir-370
|
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| Node of Origin (locus) |
Boreoeutheria
|
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| Node of Origin (family) |
Boreoeutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054694.2: 105337141-105337197 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGUACAAGUCGGGGCACAAGACAGAGAAGCCAGGUCACGUCUCUGCAGUUACACAGCUCACGAGUGCCUGCUGGGGUGGAACCUGGUCUGUCUGUCUGUCUAACACCAGAGCUCGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGUACAAGUCGGGGCACA--| GA - CA GU U U ACAGC
AGACAGA AG CCAGGU C CUC GCAG UAC \
UCUGUCU UC GGUCCA G GGG CGUC GUG U
GGGCUCGAGACCACAAUCUG^ G- U AG UG U C AGCAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-370_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAGGUCACGUCUCUGCAGUUAC -22
Get sequence
|
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| Mature sequence |
Pab-Mir-370_3p |
| mirBase accession | None |
|---|
| Sequence |
35- GCCUGCUGGGGUGGAACCUGGU -57
Get sequence
|
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