MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-337

Family name MIR-337 (all species)
Seed CCUAUAU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Cja-Mir-337  Cpo-Mir-337-v1  Cpo-Mir-337-v2  Dno-Mir-337-v1  Dno-Mir-337-v2  Eca-Mir-337  Eca-Mir-337-as  Hsa-Mir-337-as  Hsa-Mir-337-v1  Hsa-Mir-337-v2  Mml-Mir-337-as  Mml-Mir-337-v1  Mml-Mir-337-v2  Mmr-Mir-337-v1  Mmr-Mir-337-v2  Mmu-Mir-337  Mmu-Mir-337-as  Ocu-Mir-337-as  Ocu-Mir-337-v1  Ocu-Mir-337-v2  Pab-Mir-337  Rno-Mir-337  Rno-Mir-337-as 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010036.1: 75676529-75676588 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCGCGCCAUAGUCAGUAGGUGGGGGGUGAGAACGGCUUCAUACAGGAGUUGAUGCACAGUUAUCCAGCUCCUAUAUGAUGCCUUUCUUCAUCCCCUUCAACCACUCGCAGCCCCCGGAC
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Structure
        10           20        30         40        50         
GUCGCGCCAUAGUCAGUA---| U         -   C   U     C      UGAUGCAC 
                     GG GGGGGGUGA GAA GGC UCAUA AGGAGU        \
                     CU UCCCCUACU CUU CCG AGUAU UCCUCG        A
CAGGCCCCCGACGCUCACCAA^ -         U   U   U     A      ACCUAUUG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Wh
Star sequence

Laf-Mir-337_5p* (predicted)

mirBase accessionNone
Sequence
0- GAACGGCUUCAUACAGGAGU -20
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Mature sequence

Laf-Mir-337_3p

mirBase accessionNone
Sequence
39- UCCUAUAUGAUGCCUUUCUUC -60
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