MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-337

Family name MIR-337 (all species)
Seed UCCUAUG
Species Horse (Equus caballus)
MiRBase ID eca-mir-337
Paralogues Eca-Mir-337-as 
Orthologues Cja-Mir-337  Cpo-Mir-337-v1  Cpo-Mir-337-v2  Dno-Mir-337-v1  Dno-Mir-337-v2  Hsa-Mir-337-as  Hsa-Mir-337-v1  Hsa-Mir-337-v2  Laf-Mir-337  Mml-Mir-337-as  Mml-Mir-337-v1  Mml-Mir-337-v2  Mmr-Mir-337-v1  Mmr-Mir-337-v2  Mmu-Mir-337  Mmu-Mir-337-as  Ocu-Mir-337-as  Ocu-Mir-337-v1  Ocu-Mir-337-v2  Pab-Mir-337  Rno-Mir-337  Rno-Mir-337-as 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-337)
Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-370 CM009171.1: 43212467-43212523 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGCGGCCGUAGUCAGUAGGUGGGGGGUGAGAACGGCUUCAUACAGGAGCUGAUGCGCAGUUACCCAGCUCCUAUGAGAUGCCUUUCCUCACCCCUUCACCUCGCGCAGCCCCCGGGCCC
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Structure
        10         20         30         40        50         
UCGCGGCCGUAGUCAGU-     -        -|  C   U  A  C       GAUGCGC 
                  AGGUG GGGGGUGA GAA GGC UC UA AGGAGCU       \
                  UCCAC UCCCCACU CUU CCG AG GU UCCUCGA       A
CCCGGGCCCCCGACGCGC     U        C^  U   U  A  A       CCCAUUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-337_5p*

mirBase accessionMIMAT0013134
Sequence
0- GAACGGCUUCAUACAGGAGCU -21
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Mature sequence

Eca-Mir-337_3p

mirBase accessionMIMAT0013135
Sequence
38- CUCCUAUGAGAUGCCUUUCCUC -60
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