MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-493

Family name MIR-493 (all species)
Seed UGUACAU
Species Horse (Equus caballus)
MiRBase ID eca-mir-493b
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cja-Mir-493  Cpo-Mir-493  Dno-Mir-493  Ete-Mir-493  Hsa-Mir-493  Laf-Mir-493  Mml-Mir-493  Mmr-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Pab-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-493)		 Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-370 CM009171.1: 43212467-43212523 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUCGGGGCUCCCUCUGGCCUCCAGGGCCUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUUCCGUGUGCCAGGCUCUGUGCCAGGCAUCAAGUAAAGGGACGU
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Structure
        10            20        30        40        50        60 
GCUUCGGGGCUCCCUCU----|  CUC        U        U           CAUUCGUU 
                     GGC   CAGGGCCU GUACAUGG AGGCUUUCAUU        \
                     CCG   GUCUCGGA CGUGUGCC UCUGGAAGUGG        U
UGCAGGGAAAUGAACUACGGA^  U--        C        U           CUUACACG 
 120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-493_5p
mirBase accessionNone
Sequence 
0- UUGUACAUGGUAGGCUUUCAUU -22
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Star sequence

Eca-Mir-493_3p*
mirBase accessionMIMAT0013163
Sequence 
41- UGAAGGUCUUCCGUGUGCCAGG -63
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