MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-493

Family name MIR-493 (all species)
Seed UGUACAU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cja-Mir-493  Cpo-Mir-493  Dno-Mir-493  Eca-Mir-493  Ete-Mir-493  Hsa-Mir-493  Laf-Mir-493  Mml-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Pab-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007663.1: 12574249-12574311 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-493)
Mir-136-v1 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Mir-136-v2 CM007663.1: 12587343-12587398 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUCGGGGCUCAUUCUGGCCUCCAGGGCUUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUACUGUGUGCCAGGCCCUGUGCCGGGCAUCGUGUAGAUGGACAU
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Structure
        10            20        30        40        50        60 
GCCUCGGGGCUCAUUCU----|  CUC        U                    CAUUCGUU 
                     GGC   CAGGGCUU GUACAUGGUAGGCUUUCAUU        \
                     CCG   GUCCCGGA CGUGUGUCAUCUGGAAGUGG        U
UACAGGUAGAUGUGCUACGGG^  U--        C                    CUUACACG 
 120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-493_5p

mirBase accessionNone
Sequence
0- UUGUACAUGGUAGGCUUUCAUU -22
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Star sequence

Mmr-Mir-493_3p*

mirBase accessionNone
Sequence
41- UGAAGGUCUACUGUGUGCCAGG -63
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