MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-493

Family name MIR-493 (all species)
Seed UGUACAU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cpo-Mir-493  Dno-Mir-493  Eca-Mir-493  Ete-Mir-493  Hsa-Mir-493  Laf-Mir-493  Mml-Mir-493  Mmr-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Pab-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131672486-131672548 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUCGGCGCUCAUUCUGGCCUCCAGGGCUUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUACUGUGUGCCAGGCCCUGUGCCAGGUAUCGUGUAGAGUCCACA
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Structure
        10            20        30        40        50        60 
GCUUCGGCGCUCAUUCU----|  CUC        U                    CAUUCGUU 
                     GGC   CAGGGCUU GUACAUGGUAGGCUUUCAUU        \
                     CCG   GUCCCGGA CGUGUGUCAUCUGGAAGUGG        U
ACACCUGAGAUGUGCUAUGGA^  U--        C                    CUUACACG 
 120       110       100          90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-493_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGUACAUGGUAGGCUUUCAUU -22
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Star sequence

Cja-Mir-493_3p* (predicted)
mirBase accessionNone
Sequence 
41- UGAAGGUCUACUGUGUGCCAGG -63
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