| MirGeneDB ID | Laf-Mir-493 |
|---|---|
| Family name | MIR-493 (all species) |
| Seed | UGUACAC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-493 Cfa-Mir-493 Cja-Mir-493 Cpo-Mir-493 Dno-Mir-493 Eca-Mir-493 Ete-Mir-493 Hsa-Mir-493 Mml-Mir-493 Mmr-Mir-493 Mmu-Mir-493 Ocu-Mir-493 Pab-Mir-493 Rno-Mir-493 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010036.1: 75678752-75678809 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUUCAGGUCUCAUUCUGGCCUCCAGGGCCUUGUACACCCUAGGCUUUCAUUCAUUGCACAUCCAGUGAAGGCCUACUGUGUGCCAGGCCCUCGGCGACACACACGCGCCACAGAUGCGet precursor sequence |
| Structure | 10 20 30 40 50 GCUUCAGGUCUCAUUCUG----| UCC U CC CAUUG GCC AGGGCCU GUACAC UAGGCUUUCAUU C CGG UCCCGGA CGUGUG AUCCGGAAGUGA A CGUAGACACCGCGCACACACAG^ C-- C UC CCUAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Laf-Mir-493_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUGUACACCCUAGGCUUUCAUU -22
Get sequence
|
| Star sequence | Laf-Mir-493_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- UGAAGGCCUACUGUGUGCCAGG -58
Get sequence
|
