MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-433

Family name MIR-433 (all species)
Seed UCAUGAU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-433  Cfa-Mir-433  Cja-Mir-433  Cpo-Mir-433  Dno-Mir-433  Eca-Mir-433  Ete-Mir-433  Hsa-Mir-433  Mml-Mir-433  Mmr-Mir-433  Mmu-Mir-433  Ocu-Mir-433  Pab-Mir-433  Rno-Mir-433 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010036.1: 75663797-75663870 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGAAGACCCAAUGCCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCGUGAAGG
Get precursor sequence
Structure
        10           20        30        40        50        60      
GAAGAAGAAGACCCAAU-  --| GG      GUA   U           U    AGAGAGGCUAGAU 
                  GC  CC  GGAGAA   CGG GAGCCUGUCAU AUUC             C
                  CG  GG  CCUCUU   GCU CUCGGGUAGUA UAGG             C
GGAAGUGCCACACCACGG  AU^ A-      GUG   C           C    AAGAGUUGUGUCU 
  130       120       110        100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Wh
Star sequence

Laf-Mir-433_5p* (predicted)

mirBase accessionNone
Sequence
0- UACGGUGAGCCUGUCAUUAUUC -22
Get sequence
Mature sequence

Laf-Mir-433_3p (predicted)

mirBase accessionNone
Sequence
52- AUCAUGAUGGGCUCCUCGGUGU -74
Get sequence