MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-1720

Family name MIR-1720 (all species)
Seed AAGCAAC
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-1720
Paralogues
Orthologues Aca-Mir-1720  Ami-Mir-1720  Cpi-Mir-1720  Gga-Mir-1720  Gja-Mir-1720  Pbv-Mir-1720  Spt-Mir-1720  Tgu-Mir-1720 
Node of Origin (locus) Diapsida
Node of Origin (family) Diapsida
Genome context
(colLiv2)		 scaffold150: 999054-999114 [-]
Clustered miRNAs
(< 50kb from Mir-1720)		 Mir-1720 scaffold150: 999054-999114 [-]
Mir-7-P1 scaffold150: 999185-999248 [-]
Precursor
(pre-Mir +30nt flank)
GAGCCAGCAGCCACAGCCGUUCUGCACUUCUGACCACCUCAGCCGUUGCUUUUGUGAGCCUCGAGAGCGAAGCAACGAGAGGCUGGUCUGAAACCCCCUCUUGCACCUGAGCCCCAGACUG
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Structure
        10        20          30         40        50        60
GAGCCAGCAGCCACAGCCGUUCUGCAC--   U     -|   AGC         UGUGAGC 
                             UUC GACCA CCUC   CGUUGCUUU       C
                             AAG CUGGU GGAG   GCAACGAAG       U
GUCAGACCCCGAGUCCACGUUCUCCCCCA   U     C^   A--         CGAGAGC 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-1720_5p*
mirBase accessionMIMAT0038693
Sequence 
0- UGACCACCUCAGCCGUUGCUUUUG -24
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Mature sequence

Cli-Mir-1720_3p
mirBase accessionMIMAT0038694
Sequence 
38- GAAGCAACGAGAGGCUGGUCUGA -61
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