MirGeneDB 3.0

MirGeneDB ID

Cpi-Mir-737

Family name MIR-737 (all species)
Seed UUUUUUU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-737
Paralogues
Orthologues Aca-Mir-737  Ami-Mir-737  Cli-Mir-737  Dre-Mir-737  Gja-Mir-737  Gmo-Mir-737  Lch-Mir-737  Loc-Mir-737  Mal-Mir-737  Mun-Mir-737  Oan-Mir-737  Pbv-Mir-737  Spt-Mir-737  Tni-Mir-737 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(chrPic1)
JH584476: 630875-630935 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGCACUGCGGUGUCACUACUCUGCUGUUAUUUUUUUAGGUUUUGAUUUUUAUUACAUCUUCAUGCGAAAAUCAAAACCUAAAGAAAAUGCUGCAAAGAUAGAUUAUUCUGCUGUUGGAU
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Structure
        10         20         30        40        50          
CUCGCACUGCGGUGUCA-   -| C   U  UA                     AUUACAU 
                  CUA CU UGC GU  UUUUUUUAGGUUUUGAUUUUU       \
                  GAU GA ACG CG  AAAGAAAUCCAAAACUAAAAG       C
UAGGUUGUCGUCUUAUUA   A^ A   U  UA                     CGUACUU 
 .       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-737_5p

mirBase accessionMIMAT0037908
Sequence
0- AUUUUUUUAGGUUUUGAUUUUU -22
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Star sequence

Cpi-Mir-737_3p*

mirBase accessionNone
Sequence
39- AAAUCAAAACCUAAAGAAAAUG -61
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