MirGeneDB ID | Loc-Mir-737 |
Family name |
MIR-737 (all species) |
Seed |
UUUUUUU |
Species |
Spotted gar (Lepisosteus oculatus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-737
Ami-Mir-737
Cli-Mir-737
Cpi-Mir-737
Dre-Mir-737
Gja-Mir-737
Gmo-Mir-737
Lch-Mir-737
Mal-Mir-737
Mun-Mir-737
Oan-Mir-737
Pbv-Mir-737
Spt-Mir-737
Tni-Mir-737
|
Node of Origin (locus) |
Osteichthyes
|
Node of Origin (family) |
Osteichthyes
|
Genome context (LepOcu1) |
LG14: 16214628-16214688 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGAUGCAUCAAGUGUUUCUGCUUUGCUGUAGUUUUUUUAGGUUUUGAUUUUUAUUGAAUUCAGAUGAGAAAACCAAAACCUAAAGAAAAUAUUGCACAGCCAGACUGUCCAUCAGUGGCCA
Get precursor sequence
|
Structure | 10 20 30 40 50
UGAUGCAUCAAGUGUUU- -| U U G A AUUGAAU
CU GCU UGC GUA UUUUUUUAGGUUUUG UUUUU \
GA CGA ACG UAU AAAGAAAUCCAAAAC AAAAG U
ACCGGUGACUACCUGUCA C^ C U A C AGUAGAC
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Br |
Br |
He |
He |
He |
He |
Ov |
Ov |
Ov |
Ov |
Te |
Te |
Te |
Te |
To |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Loc-Mir-737_5p |
mirBase accession | None |
Sequence |
0- GUUUUUUUAGGUUUUGAUUUUU -22
Get sequence
|
Star sequence |
Loc-Mir-737_3p* |
mirBase accession | None |
Sequence |
39- AAACCAAAACCUAAAGAAAAUA -61
Get sequence
|