| MirGeneDB ID | Dre-Mir-737 |
|---|
| Family name |
MIR-737 (all species) |
|---|
| Seed |
UUUUUUU |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
dre-mir-737
|
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| Paralogues |
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| Orthologues |
Aca-Mir-737
Ami-Mir-737
Cli-Mir-737
Cpi-Mir-737
Gja-Mir-737
Gmo-Mir-737
Lch-Mir-737
Loc-Mir-737
Mal-Mir-737
Mun-Mir-737
Oan-Mir-737
Pbv-Mir-737
Spt-Mir-737
Tni-Mir-737
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
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Genome context
(danRer11) |
chr18: 45962916-45962976 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUAAGCUCUCCCACAGCUGCUGUGCUGUUGUUUUUUUAGGUUUUGAUUUUUGUGAAAUGUCGAUGAGAAAAUCAAAACCUAAAGAAAAUACUGCGCAGAUAGAUGGACAUCACCUCUGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUAAGCUCUCCCACAG- -| U UG GUGAAAU
CUG CUGUGC GU UUUUUUUAGGUUUUGAUUUUU \
GAU GACGCG CA AAAGAAAUCCAAAACUAAAAG G
CCGUCUCCACUACAGGUA A^ U UA AGUAGCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut -1 on both arms. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
| |
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| Mature sequence |
Dre-Mir-737_5p |
| mirBase accession | MIMAT0032013 |
|---|
| Sequence |
0- GUUUUUUUAGGUUUUGAUUUUU -22
Get sequence
|
|---|
| Star sequence |
Dre-Mir-737_3p* |
| mirBase accession | MIMAT0003768 |
|---|
| Sequence |
39- AAAUCAAAACCUAAAGAAAAUA -61
Get sequence
|
|---|
| Proposed targets |
TargetScanFish: dre-miR-737
|
|---|
