MirGeneDB 3.0
MirGeneDB ID

Cte-Novel-1-P1a4

Family name CTE-NOVEL-1 (all species)
Seed CUGGUAC
Species Polychaete worm (Capitella teleta)
MiRBase ID
Paralogues Cte-Novel-1-P1a1  Cte-Novel-1-P1a2a  Cte-Novel-1-P1a2b  Cte-Novel-1-P1a3  Cte-Novel-1-P1a5  Cte-Novel-1-P1a6  Cte-Novel-1-P1a7a  Cte-Novel-1-P1a7b  Cte-Novel-1-P1b1  Cte-Novel-1-P1b2  Cte-Novel-1-P1c1a  Cte-Novel-1-P1c1b  Cte-Novel-1-P1c2  Cte-Novel-1-P1c3  Cte-Novel-1-P1c4  Cte-Novel-1-P1c5  Cte-Novel-1-P1c6a  Cte-Novel-1-P1c6b  Cte-Novel-1-P1c7  Cte-Novel-1-P1d  Cte-Novel-1-P1e1a  Cte-Novel-1-P1e1b  Cte-Novel-1-P1e2  Cte-Novel-1-P1e3  Cte-Novel-1-P1e4  Cte-Novel-1-P1e5  Cte-Novel-1-P1e6a  Cte-Novel-1-P1e6b  Cte-Novel-1-P1e7  Cte-Novel-1-P1e8a  Cte-Novel-1-P1e8b  Cte-Novel-1-P1e8c  Cte-Novel-1-P1e9  Cte-Novel-1-P1e10  Cte-Novel-1-P1f1-v1  Cte-Novel-1-P1f1-v2  Cte-Novel-1-P1f2a-v1  Cte-Novel-1-P1f2a-v2  Cte-Novel-1-P1f2b-v1  Cte-Novel-1-P1f2b-v2  Cte-Novel-1-P1f2c-v1  Cte-Novel-1-P1f2c-v2  Cte-Novel-1-P1f2d-v1  Cte-Novel-1-P1f2d-v2  Cte-Novel-1-P1f3-v1  Cte-Novel-1-P1f3-v2 
Orthologues
Node of Origin (locus) C. teleta
Node of Origin (family) C. teleta
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_488: 127626-127684 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUAGUUGACGCUGUUUGGUCUUGCCUUUCCUGGUACUCUGACUGCUUGUGUUGCUUCGAAGCUCAUAAGCACUACGAGUACUGGAAGAGGCAGGGUCUAAAACUCCUGAAUAUGAAU
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Structure
        10          20        30        40        50         
UGGUAGUUGACGCUGUUU--|GU         C UG      UGAC        UUGCUU 
                    G  CUUGCCUUU C  GUACUC    UGCUUGUG      \
                    C  GGACGGAGA G  CAUGAG    ACGAAUAC      C
UAAGUAUAAGUCCUCAAAAU^UG         A GU      CAUC        UCGAAG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr To
Mature sequence

Cte-Novel-1-P1a4_5p
mirBase accessionNone
Sequence 
0- CCUGGUACUCUGACUGCUUGUG -22
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Co-mature sequence

Cte-Novel-1-P1a4_3p
mirBase accessionNone
Sequence 
37- UAAGCACUACGAGUACUGGAAG -59
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