| MirGeneDB ID | Dan-Mir-1010 |
|---|
| Family name |
MIR-1010 (all species) |
|---|
| Seed |
UUCACCU |
|---|
| Species |
Fruit fly (Drosophila ananassae) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Dme-Mir-1010
Dmo-Mir-1010
Dsi-Mir-1010
Dya-Mir-1010
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
|---|
Genome context
(Dana_caf1) |
scaffold_13340: 9102993-9103066 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGUACACUUCCGUGUUCGUGCUUAACGGGUAAGUGGUGUAGAUGAAACAAAUUUACCAACAAUAUUUUUGUUGGAUUGUUUCACCUAUCGUUCCAUUUGCAGCUAUGAGGACCUGGAGCUUUUCAAGGAGCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGUACACUUCCGUGUUC- G ACGG- U---| A AAUUUACCAACAA
GU CUUA GUAAGUGG GUAG UGAAACA \
CA GAGU CGUUUACC UAUC ACUUUGU U
UCGAGGAACUUUUCGAGGUC G AUCGA UUGC^ C UAGGUUGUUUUUA
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dan-Mir-1010_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GUAAGUGGUGUAGAUGAAACA -21
Get sequence
|
|---|
| Mature sequence |
Dan-Mir-1010_3p |
| mirBase accession | None |
|---|
| Sequence |
50- UUUCACCUAUCGUUCCAUUUGCAG -74
Get sequence
|
|---|
