| MirGeneDB ID | Dmo-Mir-1010 |
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| Family name |
MIR-1010 (all species) |
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| Seed |
UUCACCU |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Dan-Mir-1010
Dme-Mir-1010
Dsi-Mir-1010
Dya-Mir-1010
|
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
|
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Genome context
(Dmoj_caf1) |
scaffold_6540: 27812521-27812593 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAGUACACCUCCGUCUUUGUGCUCAACGGGUAAGUGGUGUAGAUGAAACAAAUUUCACAACAAUUUUUUGUUGGAUUGUUUCACCUAUCGUUCCAUUUGCAGGUACGAGGAUUUGGAGCUGUUCAAGGAACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGUACACCUCCGUCUUU- G A- GG U---| A AAUUUCACAACA
GU CUC AC GUAAGUGG GUAG UGAAACA A
UA GAG UG CGUUUACC UAUC ACUUUGU U
UCAAGGAACUUGUCGAGGUU G CA GA UUGC^ C UAGGUUGUUUUU
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Dmo-Mir-1010_5p* |
| mirBase accession | None |
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| Sequence |
0- GUAAGUGGUGUAGAUGAAACA -21
Get sequence
|
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| Mature sequence |
Dmo-Mir-1010_3p |
| mirBase accession | None |
|---|
| Sequence |
49- UUUCACCUAUCGUUCCAUUUGCAG -73
Get sequence
|
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