MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-1010

Family name MIR-1010 (all species)
Seed UUCACCU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-1010
Paralogues
Orthologues Dan-Mir-1010  Dmo-Mir-1010  Dsi-Mir-1010  Dya-Mir-1010 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_melanogaster_BDGP6)
3R: 22292879-22292949 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGUACACCUCCGUCUUUGUGCUCAACGGGUAAGUGGUGUAGAUGAAACAAAUUUACCAACAAUUUUGUUGGAUUGUUUCACCUAUCGUUCCAUUUGCAGCUACGAGGACCUGGAACUGUUCAAGGAACU
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Structure
        10         20        30            40        50        60   
GGAGUACACCUCCGUCUUU-  G   AACGG-        U---|   A       AAUUUACCAAC 
                    GU CUC      GUAAGUGG    GUAG UGAAACA           A
                    CA GAG      CGUUUACC    UAUC ACUUUGU           A
UCAAGGAACUUGUCAAGGUC  G   CAUCGA        UUGC^   C       UAGGUUGUUUU 
 .       120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-1010_5p*

mirBase accessionMIMAT0020905
Sequence
0- GUAAGUGGUGUAGAUGAAACA -21
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Mature sequence

Dme-Mir-1010_3p

mirBase accessionMIMAT0005023
Sequence
47- UUUCACCUAUCGUUCCAUUUGCAG -71
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Proposed targets microrna.org: MIMAT0005023
TargetScanFly: dme-miR-1010