MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-1010

Family name MIR-1010 (all species)
Seed UUCACCU
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-1010  Dme-Mir-1010  Dmo-Mir-1010  Dsi-Mir-1010 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
3R: 18962302-18962376 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGUACACGUCCGUGUUUGUGCUCAACGGGUAAGUGGUGUAGAUGAAACAAAUUUACCAACAAUAUUUUUUGUUGGAUUGUUUCACCUAUCGUUCCAUUUGCAGCUACGAGGACCUGGAACUGUUCAAGGAACU
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Structure
        10         20        30            40        50        60     
GGAGUACACGUCCGUGUUU-  G   AACGG-        U---|   A       AAUUUACCAACAA 
                    GU CUC      GUAAGUGG    GUAG UGAAACA             U
                    CA GAG      CGUUUACC    UAUC ACUUUGU             A
UCAAGGAACUUGUCAAGGUC  G   CAUCGA        UUGC^   C       UAGGUUGUUUUUU 
   130       120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-1010_5p*

mirBase accessionNone
Sequence
0- GUAAGUGGUGUAGAUGAAACA -21
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Mature sequence

Dya-Mir-1010_3p

mirBase accessionNone
Sequence
51- UUUCACCUAUCGUUCCAUUUGCAG -75
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