MirGeneDB ID | Dan-Mir-284 |
Family name |
MIR-284 (all species) |
Seed |
UCAGCAA |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
dan-mir-284
|
Paralogues |
|
Orthologues |
Dme-Mir-284
Dmo-Mir-284
Dsi-Mir-284
Dya-Mir-284
Gpa-Mir-284
|
Node of Origin (locus) |
Glossinidae + Drosophilidae
|
Node of Origin (family) |
Glossinidae + Drosophilidae
|
Genome context (Dana_caf1) |
scaffold_12911: 3308013-3308092 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUACCAACAAAAGGCAAUUGCGUUGCAGUUCCUGGAAUUAAGUUGACUGUGUAGCCUGUGAGGGCAAGGCUUGAGAACUGCUUCAGAAGUCAGCAACUUGAUUCCAGCAAUUGCGGCCCAAGUACAGCAGAAAGAGCCGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUACCAACAAAAGGCAA--| C C A UGUAGCCUGUGAGGGCAAGG
UUG GUUGCAGUU CUGGAAUUAAGUUG CUG \
AAC CGGCGUUAA GACCUUAGUUCAAC GAC C
UGCCGAGAAAGACGACAUG^ C C - UGAAGACUUCGUCAAGAGUU
. 130 120 110 100 90 80 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dan-Mir-284_5p* |
mirBase accession | None |
Sequence |
0- CCUGGAAUUAAGUUGACUGUGUAGC -25
Get sequence
|
Mature sequence |
Dan-Mir-284_3p |
mirBase accession | MIMAT0008415 |
Sequence |
58- GUCAGCAACUUGAUUCCAGCAA -80
Get sequence
|