MirGeneDB 3.0

MirGeneDB ID

Gpa-Mir-284

Family name MIR-284 (all species)
Seed CUGGAAU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Dan-Mir-284  Dme-Mir-284  Dmo-Mir-284  Dsi-Mir-284  Dya-Mir-284 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Glossinidae + Drosophilidae
Genome context
(GpalI1)
Scaffold36: 918599-918678 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAAGAGCUCAAGGAGUGUGUUUGCUAUUCCUGGAAUUAAGUUGACUGUGCAGCCUCUUUCCGCAUGGCUUGUGCUCAGCAAUCAAAGUCAGCAACUUGAUUCCAGCAAUUGCGGUCAUACACAAACAGCGCUAAAAUG
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Structure
        10          20        30        40        50        60        70
CUCAAGAGCUCAAGGAG--|   U    U   C              A   U  AGCCUCUUUCCGCAUGG 
                   UGUG UUGC AUU CUGGAAUUAAGUUG CUG GC                 C
                   AUAC GGCG UAA GACCUUAGUUCAAC GAC UG                 U
GUAAAAUCGCGACAAACAC^   U    U   C              -   -  AAACUAACGACUCGUGU 
.       130       120       110       100          90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Mature sequence

Gpa-Mir-284_5p

mirBase accessionNone
Sequence
0- CCUGGAAUUAAGUUGACUGUGCAG -24
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Star sequence

Gpa-Mir-284_3p*

mirBase accessionNone
Sequence
58- GUCAGCAACUUGAUUCCAGCAA -80
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