MirGeneDB ID | Dsi-Mir-284 |
Family name |
MIR-284 (all species) |
Seed |
CUGGAAU |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-284
|
Paralogues |
|
Orthologues |
Dan-Mir-284
Dme-Mir-284
Dmo-Mir-284
Dya-Mir-284
Gpa-Mir-284
|
Node of Origin (locus) |
Glossinidae + Drosophilidae
|
Node of Origin (family) |
Glossinidae + Drosophilidae
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
3R: 12780995-12781074 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUCGGAUAACGGGUAAUUGCGUUGCAGUUCCUGGAAUUAAGUUGACUGUGUAGCCUGUGAGGGCAAGGCUUGAAUACUGCUCCUGAAGUCAGCAACUUGAUUCCAGCAAUUGCGGCCCGAUAUUCCGCAACAAUGAGCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUUCGGAUAACGGGUAA--| C C A UGUAGCCUGUGAGGGCAAGG
UUG GUUGCAGUU CUGGAAUUAAGUUG CUG \
AGC CGGCGUUAA GACCUUAGUUCAAC GAC C
ACGAGUAACAACGCCUUAU^ C C - UGAAGUCCUCGUCAUAAGUU
. 130 120 110 100 90 80 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dsi-Mir-284_5p |
mirBase accession | None |
Sequence |
0- CCUGGAAUUAAGUUGACUGUGUAGC -25
Get sequence
|
Co-mature sequence |
Dsi-Mir-284_3p |
mirBase accession | MIMAT0008902 |
Sequence |
58- GUCAGCAACUUGAUUCCAGCAA -80
Get sequence
|