MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-969

Family name MIR-969 (all species)
Seed AGUUCCA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Dme-Mir-969  Dmo-Mir-969  Dsi-Mir-969  Dya-Mir-969 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dana_caf1)
scaffold_13335: 1608001-1608062 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-969)
Mir-210-v1 scaffold_13335: 1604034-1604092 [-] Ensembl
Mir-210-v2 scaffold_13335: 1604034-1604092 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUUGGAAAAUAUUCUGUUUUACGUGCGAGUUCCACUAAGCAAGUUUUGAGAAUUUUUUAAAAACAAAAACUUGACACGUUGAGCUCGUCCGUGGGGCAGAUAAUGUCAGCAGUAUAUA
Get precursor sequence
Structure
        10          20        30        40        50        60
UUUUUUUGGAAAAUAUU--|         UG       C  UAAG        GAGAAUUU 
                   CUGUUUUACG  CGAGUUC AC    CAAGUUUU        U
                   GACGGGGUGC  GCUCGAG UG    GUUCAAAA        U
AUAUAUGACGACUGUAAUA^         CU       U  CACA        ACAAAAAU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Fe
Mature sequence

Dan-Mir-969_5p

mirBase accessionNone
Sequence
0- GAGUUCCACUAAGCAAGUUUU -21
Get sequence
Co-mature sequence

Dan-Mir-969_3p

mirBase accessionNone
Sequence
41- AACUUGACACGUUGAGCUCGU -62
Get sequence