MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-969

Family name MIR-969 (all species)
Seed AGUUCCA
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-969
Paralogues
Orthologues Dan-Mir-969  Dmo-Mir-969  Dsi-Mir-969  Dya-Mir-969 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_melanogaster_BDGP6)		 X: 18124375-18124436 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-969)		 Mir-969 X: 18124375-18124436 [+] UCSC Ensembl
Mir-210-v1 X: 18128234-18128292 [+] UCSC Ensembl
Mir-210-v2 X: 18128234-18128292 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGAAUCCCCAAGUCUCUGUCCUACGUCCGAGUUCCACUAAGCAAGUUUUGAGAUCGUUUUAAAAACAAAAACUUGACACGUUGAGCUCGUUCGUGGGAUGGACUACUGCAAUUCGAAAUC
Get precursor sequence
Structure
        10          20        30        40        50        60
GGUGAAUCCCCAAGUCU--|         UC       C  UAAG        GAGAUCGU 
                   CUGUCCUACG  CGAGUUC AC    CAAGUUUU        U
                   GGUAGGGUGC  GCUCGAG UG    GUUCAAAA        U
CUAAAGCUUAACGUCAUCA^         UU       U  CACA        ACAAAAAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-969_5p
mirBase accessionMIMAT0005485
Sequence 
0- GAGUUCCACUAAGCAAGUUUU -21
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Proposed targets microrna.org: MIMAT0005485
TargetScanFly: dme-miR-969
Co-mature sequence

Dme-Mir-969_3p
mirBase accessionMIMAT0020866
Sequence 
41- AACUUGACACGUUGAGCUCGU -62
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