| MirGeneDB ID | Dgr-Mir-2-o37 |
|---|---|
| Family name | MIR-2 (all species) |
| Seed | AUCACAG |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-2-o36 Dgr-Mir-2-o38 Dgr-Mir-2-o39 Dgr-Mir-2-P12 |
| Orthologues | Gsp-Mir-2 Ple-Mir-2 |
| Node of Origin (locus) | D. gyrociliatus |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000007.1: 2553124-2553185 [+] |
| Precursor (pre-Mir +30nt flank) | CAGCUCGUUGCCUCUAACGCGUUGAGUGACGCAUCAAAGUGACUGAGAAAUGGCUGCUUAAUUGCACAUAUCACAGCCAGCUUUGAUGAGCUAUUCAAUGUGACGGUACAAUUCUUCGUCAGGet precursor sequence |
| Structure | 10 20 30 40 50 CAGCUCGUUGCCUCUAA--- ACG GA-| A A GCUGCU CGCGUUGAGUG CAUCAAAGU CUG GA AUG U GUGUAACUUAU GUAGUUUCG GAC CU UAC A GACUGCUUCUUAACAUGGCA CGA ACC^ A A ACGUUA 120 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-2 genes were present in the last common ancestor of protostomes and how the multiple paralogues in lophotrochozoans relate to the four Mir-2 genes in arthropods. Thus all lophotrochozoan genes aside from Mir-2-P12 are classified as orphans pending further data and analysis. |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Dgr-Mir-2-o37_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GCAUCAAAGUGACUGAGAAAUG -22
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|
| Mature sequence | Dgr-Mir-2-o37_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UAUCACAGCCAGCUUUGAUGAGCU -62
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|
