MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-279-o4

Family name MIR-279 (all species)
Seed GACUAGA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-279-P1  Dlo-Mir-279-P2  Dlo-Mir-279-P3 
Orthologues Agr-Mir-279  Bpl-Mir-279  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Lpo-Mir-279-P4  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) D. longicaudata
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087231.1: 7609173-7609233 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGGUUUUUUAAGUUUUUGUUUUGAUUGUUGGACGCGUGAGCUCUAGUGUCAUGUGUAAUUAGAAUCAUGACUAGAGUCACACUCGUCCAAUGAUUGGAAUUAUUUUCUCCACUUGUUUAU
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Structure
        10          20        30        40         50        60
AUGGUUUUUUAAGUUUUU--    UG  UG       C   A-|     GU      UGUAA 
                    GUUU  AU  UUGGACG GUG  GCUCUA  GUCAUG     U
                    UAAG  UA  AACCUGC CAC  UGAGAU  CAGUAC     U
UAUUUGUUCACCUCUUUUAU    GU  GU       U   AC^     --      UAAGA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sr Sr
Star sequence

Dlo-Mir-279-o4_5p*
mirBase accessionNone
Sequence 
0- GGACGCGUGAGCUCUAGUGUCAUG -24
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Mature sequence

Dlo-Mir-279-o4_3p
mirBase accessionNone
Sequence 
38- UGACUAGAGUCACACUCGUCCAA -61
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