MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-279-P2

Family name MIR-279 (all species)
Seed GACUAGA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-279-o4  Dlo-Mir-279-P1  Dlo-Mir-279-P3 
Orthologues Aae-Mir-279-P2  Aga-Mir-279-P2  Agr-Mir-279  Bge-Mir-279-P2  Bko-Mir-279-o2  Bpl-Mir-279  Dan-Mir-279-P2  Dma-Mir-279-P2  Dme-Mir-279-P2  Dmo-Mir-279-P2  Dpu-Mir-279-P2  Dsi-Mir-279-P2  Dya-Mir-279-P2  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gpa-Mir-279-P2  Gsa-Mir-279  Gsp-Mir-279  Hme-Mir-279-o2  Hme-Mir-279-P2  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279  Tca-Mir-279-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087234.1: 1077968-1078030 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAUGUGAAAAAAUUAUCCCGACUGCACUCAGUGAGUGACGGUCUAGUGCACAUAUGAUAAAAUGAAAUUGUGACUAGAUCCACACUCAUUAAGUACGCUCGGUGAUUAACAACAAGUGGCCC
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Structure
        10          20        30        40        50        60 
CAAUGUGAAAAAAUUAUC--|   C  C   C        AC        G    UAUGAUA 
                    CCGA UG ACU AGUGAGUG  GGUCUAGU CACA       A
                    GGCU GC UGA UUACUCAC  CUAGAUCA GUGU       A
CCCGGUGAACAACAAUUAGU^   C  A   A        AC        -    UAAAGUA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr
Star sequence

Dlo-Mir-279-P2_5p*
mirBase accessionNone
Sequence 
0- AGUGAGUGACGGUCUAGUGCACA -23
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Mature sequence

Dlo-Mir-279-P2_3p
mirBase accessionNone
Sequence 
41- UGACUAGAUCCACACUCAUUAA -63
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