MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-956-v2

Family name MIR-956 (all species)
Seed UCGAGAC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-956
Paralogues Dme-Mir-956-v1 
Orthologues Dan-Mir-956-v2  Dmo-Mir-956-v2  Dsi-Mir-956-v2  Dya-Mir-956-v2  Gpa-Mir-956-v2 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Glossinidae + Drosophilidae
Genome context
(Drosophila_melanogaster_BDGP6)		 3L: 11773740-11773868 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-956-v2)		 Mir-314 3L: 11773014-11773101 [+] UCSC Ensembl
Mir-956-v1 3L: 11773740-11773868 [-] UCSC Ensembl
Mir-956-v2 3L: 11773740-11773868 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAUAUGAGCACUUUUCCUGAUCGUUAUCGUGUUUGGAAUGGUCUCGUUAGCUAACGGAUGAGCAAGUGCUCGGCUCACUGGCCCAAAUGCAGUUUGCCCGGAGACGCCGGUUAACCCAGCACUGAAAUGUGUAGUUUCGAGACCACUCUAAUCCAUUGCAGCAUUUUCAACAAUAUGCAAAUUCAUC
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Structure
        10        20         30         40        50        60        70        80        90    
UUGAUAUGAGCACUUUUCCUGAUC-   AUC   U-|    A        UU   UAACGGAUGAGCAAGUGCUCGGCUCACUGGCCCAAAUGCA 
                         GUU   GUG  UUGGA UGGUCUCG  AGC                                        G
                         CGA   UAC  AAUCU ACCAGAGC  UUG                                        U
CUACUUAAACGUAUAACAACUUUUA   CGU   CU^    C        U-   AUGUGUAAAGUCACGACCCAAUUGGCCGCAGAGGCCCGUU 
       180       170       160       150       140        130       120       110       100
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-956-v2_5p*
mirBase accessionMIMAT0020850
Sequence 
0- GUGUUUGGAAUGGUCUCGUUAGC -23
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Mature sequence

Dme-Mir-956-v2_3p
mirBase accessionMIMAT0005469
Sequence 
107- UUCGAGACCACUCUAAUCCAUU -129
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Proposed targets microrna.org: MIMAT0005469
TargetScanFly: dme-miR-956