| MirGeneDB ID | Gpa-Mir-956-v2 |
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| Family name |
MIR-956 (all species) |
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| Seed |
UCGAGAC |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-956-v1
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| Orthologues |
Dan-Mir-956-v2
Dme-Mir-956-v2
Dmo-Mir-956-v2
Dsi-Mir-956-v2
Dya-Mir-956-v2
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| Node of Origin (locus) |
Glossinidae + Drosophilidae
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| Node of Origin (family) |
Glossinidae + Drosophilidae
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Genome context
(GpalI1) |
Scaffold41: 1675605-1675724 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAGAUUUAUAUUAUAGAUAUAUUCUUAUCGCGUUUGGAAUGGUCUCGCUAGCUAACGGCUAAAGUUUUGUCAUGACACAGAAAUCCAUUAGAACAUAAUACAUAACAUGGCACCACCUUGAUGAUAGUUUCGAGACCACUCUAAUCACAUGCAAAAUUUUCAAUUAUAUGCAAAUUUUAU
Get precursor sequence
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| Structure | 10 20 30 40 50 60 70 80
UAGAUUUAUAUUAUAGAUAUAUUCUUAUC ----| A CU UAACGGCUAAAGUUUUGUCAUGACACAGAAAUCCAU
GCGU UUGGA UGGUCUCG AGC U
CGUA AAUCU ACCAGAGC UUG A
UAUUUUAAACGUAUAUUAACUUUUAAAA- CACU^ C U- AUAGUAGUUCCACCACGGUACAAUACAUAAUACAAG
. 170 160 150 140 130 120 110 100 90 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Gpa-Mir-956-v2_5p* |
| mirBase accession | None |
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| Sequence |
0- CGUUUGGAAUGGUCUCGCUAGC -22
Get sequence
|
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| Mature sequence |
Gpa-Mir-956-v2_3p |
| mirBase accession | None |
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| Sequence |
98- UUCGAGACCACUCUAAUCACAU -120
Get sequence
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