MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-956-v1

Family name MIR-956 (all species)
Seed UUCGAGA
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-956-v2 
Orthologues Dan-Mir-956-v1  Dme-Mir-956-v1  Dmo-Mir-956-v1  Dsi-Mir-956-v1  Dya-Mir-956-v1 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Glossinidae + Drosophilidae
Genome context
(GpalI1)		 Scaffold41: 1675605-1675724 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAUUUAUAUUAUAGAUAUAUUCUUAUCGCGUUUGGAAUGGUCUCGCUAGCUAACGGCUAAAGUUUUGUCAUGACACAGAAAUCCAUUAGAACAUAAUACAUAACAUGGCACCACCUUGAUGAUAGUUUCGAGACCACUCUAAUCACAUGCAAAAUUUUCAAUUAUAUGCAAAUUUUAU
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Structure
        10        20        30            40        50        60        70        80         
UAGAUUUAUAUUAUAGAUAUAUUCUUAUC    ----|    A        CU    AACGGCUAAAGUUUUGUCAUGACACAGAAAUCCAU 
                             GCGU    UUGGA UGGUCUCG  AGCU                                   U
                             CGUA    AAUCU ACCAGAGC  UUGA                                   A
UAUUUUAAACGUAUAUUAACUUUUAAAA-    CACU^    C        U-    UAGUAGUUCCACCACGGUACAAUACAUAAUACAAG 
.       170       160        150       140       130        120       110       100        90
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Star sequence

Gpa-Mir-956-v1_5p*
mirBase accessionNone
Sequence 
0- CGUUUGGAAUGGUCUCGCUAGCU -23
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Mature sequence

Gpa-Mir-956-v1_3p
mirBase accessionNone
Sequence 
97- UUUCGAGACCACUCUAAUCACAU -120
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