| MirGeneDB ID | Dmo-Mir-963-v1 |
|---|
| Family name |
MIR-963 (all species) |
|---|
| Seed |
CAAGGUA |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Dmo-Mir-963-v2
|
|---|
| Orthologues |
Dan-Mir-963
Dme-Mir-963-v1
Dsi-Mir-963
Dya-Mir-963
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6500: 14019392-14019454 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGAGUGCGCACUGAAUCGGUCUAAUCUAAAACAAGGUACAUAUCAGAGUGUUUCCCGUAUUCGAGUUUUGAAACCUCUGUAUAUACCUUUCAUUAGAUUCAACCGAAAGUCCAUAAAUAUUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAGUGCGCACUGAAUC--| CU AAC C U U CCGUAUU
GGU AAUCUAA AAGGUA AUA CAGAG GUUUC \
CCA UUAGAUU UUCCAU UAU GUCUC CAAAG C
AGUUAUAAAUACCUGAAAG^ AC ACU A - - UUUUGAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dmo-Mir-963-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAAGGUACAUAUCAGAGUGUUUC -24
Get sequence
|
|---|
| Star sequence |
Dmo-Mir-963-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- AACCUCUGUAUAUACCUUUCAU -63
Get sequence
|
|---|
